The agency has levelled charges of criminal conspiracy and criminal breach of trust under the Ranbir Penal Code against Abdullah and three others.
The series-deciding final ODI will be played at Leeds on July 17.
"This thing comes up again and again when he's not able to play the way he does," Kohli said at the post-match presentation ceremony.
Dhoni was widely criticised for not showing initiative in his 37-ball 58 as India could only manage 236 in 50 overs after England posted 322 for seven.
It is a final very few people could have anticipated four weeks ago, when the competition in Russia was just beginning.
In a tournament filled with dramatic ups and downs, France stood tall in the end, keeping cool at all times despite not being in its sublime form in the group stage.