The bench listed the matter for further hearing on March 7.
Newly-appointed CBI Chief Rishi Kumar Shukla takes charge over the probe agency on Monday.
The Centre has appointed M Nageshwara Rao as the interim CBI chief.
He also demanded that the government come clean on the issues and make public the CVC report, Justice A K Patnaik's report and minutes of the January 10 meeting.
CBI Director Alok Verma revoked most of the transfers effected by then Director (in-charge) M Nageshwar Rao as he resumed duties.
Rao accused Odisha cadre IPS officers of being 'highly divided with incessant internecine fights.'
The Supreme Court said that decisions taken by CBI interim chief M. Nageshwar Rao Rao since October 23 till date shall not be implemented.
In his petition, Alok Verma has suggested that the government may not be in agreement with the course of CBI probe into cases relating to some "high functionaries".
The government defended its decision to send CBI Director Alok Verma on leave.
In a tweet, Gandhi said, "CBI Chief Alok Verma was collecting documents relating to the Rafale scam. He was forcibly sent on leave".
Congress chief spokesperson Randeep Surjewala said the Modi government has put the "last nail" in the independence of the CBI by removing Verma.
Arun Jaitley sad the government's decision to remove CBI Director Alok Verma and Special Director Rakesh Asthana is based on the CVC's recommendations.
M Nageswar Rao, who took over the duties and functions of CBI director late last night, appointed Satish Dagar as Superintendent of Police to probe the case.
The government stripped CBI director Alok Verma and his deputy Rakesh Asthana of their charge and appointed M Nageshwar Rao as interim chief. Here are the highlights:
Nageshwar Rao, a 1986 batch Indian Police Service officer of the Orissa cadre, hails from Telangana's Warangal district.
Bihar Chief Minister Nitish Kumar offers prayers at a temple situated on the Mandar mountain in Banka district.PTI Photo
Actress and Trinamool Congress MP Mimi Chakraborty at the launch of a collection of jewelleries, ahead of Durga Puja festivals, in Kolkata.PTI Photo
People Democratic Party (PDP) President Mehbooba Mufti addresses a press conference at the party office in Jammu.PTI Photo
Jammu & Kashmir Public Health Engineering (PHE) daily wagers shout slogans during a protest over their various demands, in Jammu.PTI Photo
Bollywood actors Rajniesh Duggal, Akansha Puri, Niharica Raizada, Sajjad Dalfarooz and Dilbar during a press conference for announcement of a web series, in Srinagar.PTI Photo
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